

Super Bust-A-Move (also known as Super Puzzle Bobble in Japan) is a 2000 game developed by Taito and published by Acclaim.
The gameplay is standard Puzzle Bobble action, but with features brought over from the arcade iteration of Super Puzzle Bobble such as giant and mini bubbles (with the sole exception being co-op.) The GameCube ports outside North America are a later version of the game and includes bonus game modes called "Shoot Bubble" that plays in a similar fashion to Space Invaders and "4P Battle" where up to four players complete their puzzle first before the others.

Point-and-click / Puzzle / Visual Novel / Fantasy / Comedy
An interactive comic with designs by Izumi Takemoto.

Platform / Puzzle / Adventure / Action / Fantasy
Tiny Bullets is an action-adventure game that plays remarkably similar to Tomb Raider. Horin has a variety of actions he can perform, including jumping, climbing, swinging on poles, pushing blocks, shooting things with his slingshot, and even picking up and throwing small objects. Making his way through different areas, he must fight with monsters, as well as avoid and escape traps. He can also find and store a variety of items, including keys and healing items to keep his health up. There is even an option to get hints on the current stage if you get stuck.

Puzzle / Adventure / Fantasy / Kids
Chao Dream Touch! Happy Anniversary is a game released for Nintendo DS in Japan on December 7, 2006. The game is based on several 1970's Shogakukan manga series. The game contains various mini games puzzles in which twenty characters from nine different comics appear.

Mushi no Idokoro is a puzzle game about insects in a fantasy world.

Puzzle / Adventure / Action / Fantasy
Venture back to Hyrule and an age of magic and heroes. The predecessors of Link and Zelda face monsters on the march when a menacing magician takes over the kingdom. Only you can prevent his evil plot from shattering the land of Hyrule. In your quest, you'll venture into twisting mazes, dungeons, palaces and shadowy forests. Test your mettle with mighty swords and magical weapons. Or heft a boulder and hurl it at your enemies. If the going gets tough, dive into a river - you can swim to escape! Learn powerful spells, locate magical artifacts and solve the mysteries of the evil magician and the hidden realm of Hyrule.

Puzzle / Adventure / Action / Fantasy
The Legend of Zelda: Ocarina of Time is the fifth main installment of The Legend of Zelda series and the first to be released for the Nintendo 64. It was one of the most highly anticipated games of its age, and is listed among the greatest video games ever created by numerous websites and magazines. The gameplay of Ocarina of Time was revolutionary for its time, it has arguably made more of an impact on later games in the series than any of its predecessors even though they had the same cores of exploration, dungeons, puzzles and item usage. Among the gameplay mechanics, one of the most noteworthy is the time-traveling system. The game begins with the player controlling the child Link, but later on an adult Link becomes a playable character as well and each of them has certain unique abilities. Ocarina of Time also introduces the use of music to solve puzzles: as new songs are learned, they can be used to solve puzzles, gain access to new areas and warp to different locations. Dungeon exploration is somewhat more puzzle-oriented than in earlier games but they are not too complex.

Point-and-click / Puzzle / Adventure / Action / Fantasy
Ghost Trick: Phantom Detective is a puzzle/adventure game for the Nintendo DS and iOS. It was developed mainly by Shu Takumi, the man behind the Ace Attorney Series. Game's story centers on the protagonist Sissel, and his ghost's struggle to discover who he was when he was alive and who killed him. The player assumes the role of this ghost, who has the ability to perform various Ghost Tricks to solve puzzles and navigate the world around him.

Puzzle / Adventure / Action / Fantasy
The Legend of Zelda: Ocarina of Time - Master Quest is a reworked version of the original Ocarina of Time for the Nintendo 64. Master Quest contains largely the same content as the original game but with more redesigned and difficult dungeons. Master Quest was available on a special bonus disc that also contained the original Ocarina of Time, it was given out in limited quantities with preorders of The Wind Waker. It was previously developed to be released as an expansion to the original game via the Nintendo 64DD, but that version was cancelled due to the lackluster sales of the hardware.